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Plant Proteomics Methods and Protocols
Title
Plant Proteomics [electronic resource] : Methods and Protocols / edited by Jesus V. Jorrin-Novo, Luis Valledor, Mari Angeles Castillejo, Maria-Dolores Rey.
ISBN
9781071605288
Edition
3rd ed. 2020.
Publication
New York, NY : Springer US : Imprint: Humana, 2020.
Physical Description
1 online resource (XV, 417 p.) 81 illus., 65 illus. in color.
Local Notes
Access is available to the Yale community.
Access and use
Access restricted by licensing agreement.
Summary
This third edition details recent advances made in the field of proteomics and the application to plant biology and translational research. In recent years, improvements have been made to protocols on high-throughput proteomics at all workflow stages, from wet to dry labs. Chapters are divided into nine parts, covering methods and protocols such as applications of gel-free, label- or label-free, imaging and targeted approaches to experimental model systems, crops and orphan species, study and analysis of PTMs, protein interactions, specific families of proteins, and finally proteomics in translational research. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls. Authoritative and cutting-edge, Plant Proteomics: Methods and Protocols, Third Edition aims to ensure successful results in the further study of this vital field.
Variant and related titles
Springer protocols (Series)
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Printed edition:
Printed edition:
Format
Books / Online
Language
English
Added to Catalog
June 19, 2020
Series
Methods in Molecular Biology, 2139
Contents
What is New in (Plant) Proteomics Methods and Protocols: the 2015-2019 Quinquennium
Multiple Biomolecule Isolation Protocol Compatible with Mass Spectrometry and Other High Throughput Analyses in Microalgae
Protein Interaction Networks: Functional and Statistical Approaches
Specific Protein Database Creation From Transcriptomics Data In Non-Model Species: Holm oak (Quercus ilex L.)
Subcellular Proteomics in Conifers: Purification of Nuclei and Chloroplast Proteomes
Apoplastic fluid preparation from Arabidopsis thaliana leaves upon interaction with a Non-Adapted Powdery Mildew Pathogen
Shotgun Proteomics of Plant Plasma Membrane and Microdomain Proteins Using Nano-LC-MS/MS
A Protocol for the Plasma Membrane Proteome Analysis of Rice Leaves
Isolation, Purity Assessment, and Proteomic Analysis of Endoplasmic Reticulum
Dimethyl Labeling-based Quantitative Proteomics of Recalcitrant Cocoa Pod Tissue
Quantitative Profiling of Protein Abundance and Phosphorylation State in Plant Tissues using Tandem Mass Tags
Optimizing Shotgun Proteomics Analysis for a Confident Protein Identification and Quantitation in Orphan Plant Species; the case of Holm oak (Quercus ilex)
Combining Targeted and Untargeted Data Acquisition To Enhance Quantitative Plant Proteomics Experiments
Phosphoproteomic Pipeline in Peels of Tropical Fruits
Label-Free Quantitative Phosphoproteomics for Algae
Targeted Quantification of Phosphopeptides by Parallel Reaction Monitoring (PRM)
Enrichment of N-linked Glycopeptides and their Identification by Complementary Fragmentation Techniques
High Resolution Lysine Acetylome Profiling By Offline Fractionation and Immunoprecipitation
A Versatile Workflow for the Identification of Protein–Protein Interactions using GFP-Trap Beads And Mass Spectrometry-Based Label-Free Quantification
In vivo cross-linking to Analyse Transient Protein-Protein Interactions
Proteomic Analysis of 14-3-3 Targets in Tomato Fruit Tissues
The use of Proteomics in Search 0f Allele Specific Proteins in (allo)polyploid Crops
Methods for Optimization of Protein Extraction and Proteogenomic Mapping in Sweetpotato
In silico Analysis of Class III peroxidases: Hypothetical Structure, Ligand Binding-Sites, Post-Translational Modifications and Interaction with Substrates
MALDI Mass Spectrometry Imaging of Peptides in Medicago truncatula Root Nodules
Cystatin Activity-Based Protease Profiling to Select Protease Inhibitors Useful in Plant Protection
Pipeline for the Metabolic Pathway Reconstruction in Plant Orphan Species
Detection of Plant Low-Abundance Proteins By Means Of Combinatorial Peptide Ligand Library Methods
iTRAQ-based Proteomic Analysis of Rice Grains.
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