Introduction / Carl C. Correll and Phoebe A. Rice
Role of water and effects of small ions in site-specific protein-DNA interactions / Linda Jen-Jacobson and Lewis A. Jacobson
Structural basis for sequence-specific DNA recognition by transcription factors and their complexes / Manqing Hong and Ronen Marmorstein
Indirect readout of DNA sequence by proteins / Catherine L. Lawson and Helen M. Berman
Single-stranded nucleic acid (SSNA)-binding proteins / Martin P. Horvath
DNA junctions and their interaction with resolving enzymes / David M.J. Lilley
RNA-protein interactions in ribonucleoprotein particles and ribonucleases / Hong Li
Bending and compaction of DNA by proteins / Reid C. Johnson, Stefano Stella and John K. Heiss
Mode of action of proteins with RNA chaperone activity / Sabine Stampfl [and others]
Structure and function of DNA topoisomerases / Ken C. Dong and James M. Berger
DNA transposases / Fred Dyda and Alison Burgess Hickman
Site-specific recombinases / Gregory D. Van Duyne
DNA nucleases / Nancy C. Horton
RNA-modifying enzymes / Adrian R. Ferré-D'amaré.