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RNA Structure Prediction
Title
RNA Structure Prediction [electronic resource] / edited by Risa Karakida Kawaguchi, Junichi Iwakiri.
ISBN
9781071627686
Edition
1st ed. 2023.
Publication
New York, NY : Springer US : Imprint: Humana, 2023.
Physical Description
1 online resource (XXII, 290 p.) 106 illus., 89 illus. in color.
Local Notes
Access is available to the Yale community.
Access and use
Access restricted by licensing agreement.
Summary
This book explores recent progress in RNA secondary, tertiary structure prediction, and its application from an expansive point of view. Because of advancements in experimental protocols and devices, the integration of new types of data as well as new analysis techniques is necessary, and this volume discusses additional topics that are closely related to RNA structure prediction, such as the detection of structure-disrupting mutations, high-throughput structure analysis, and 3D structure design. Written for the highly successful Methods in Molecular Biology series, chapters feature the kind of detailed implementation advice that leads to quality research results. Authoritative and practical, RNA Structure Prediction serves as a valuable guide for both experimental and computational RNA researchers.
Variant and related titles
Springer protocols (Series)
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Format
Books / Online
Language
English
Added to Catalog
April 05, 2023
Series
Methods in Molecular Biology, 2586
Contents
Rtools: A Web Server for Various Secondary Structural Analyses on Single RNA Sequences
Linear-Time Algorithms for RNA Structure Prediction
Genome-Wide RNA Secondary Structure Prediction
Nucleic Acid Structure Prediction Including Pseudoknots through Direct Enumeration of States: A User's Guide to the LandscapeFold Algorithm
Metrics for RNA Secondary Structure Comparison
RNA Secondary Structure Prediction Based on Energy Models
RNA Secondary Structure Alteration Caused by Single Nucleotide Variants
Evolutionary Conservation of RNA Secondary Structure
Network-Based Structural Alignment of RNA Sequences Using TOPAS
Fast RNA-RNA Interaction Prediction Methods for Interaction Analysis of Transcriptome-Scale Large Datasets
Web Services for RNA-RNA Interaction Prediction
ResidualBind: Uncovering Sequence-Structure Preferences of RNA-Binding Proteins with Deep Neural Networks
RNA Structure Determination by High-Throughput Structural Analysis
RNA 3D Modeling with FARFAR2, Online
Automated 3D Design and Evaluation of RNA Nanostructures with RNAMake
RNA 3D Structure Comparison Using RNA-Puzzles Toolkit.
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